Running updates today on one of Virtualmin servers is giving the following error:
yum update
Loaded plugins: fastestmirror, presto, priorities
Loading mirror speeds from cached hostfile
* base: mirrors.bluehost.com
* epel: mirrors.kernel.org
* rpmforge: mirror.hmc.edu
180 packages excluded due to repository priority protections
Setting up Update Process
Resolving Dependencies
There are unfinished transactions remaining. You might consider running yum-complete-transaction first to finish them.
--> Running transaction check
---> Package bind.i686 32:9.8.2-0.17.rc1.el6 will be updated
---> Package bind.i686 32:9.8.2-0.17.rc1.el6_4.6 will be an update
---> Package bind-utils.i686 32:9.8.2-0.17.rc1.el6 will be updated
---> Package bind-utils.i686 32:9.8.2-0.17.rc1.el6_4.6 will be an update
---> Package cvs.i686 0:1.11.23-15.el6 will be updated
---> Package cvs.i686 0:1.11.23-16.el6 will be an update
---> Package dhclient.i686 12:4.1.1-34.P1.el6.centos will be updated
---> Package dhclient.i686 12:4.1.1-38.P1.el6.centos will be an update
---> Package dovecot.i686 1:2.0.9-5.el6 will be updated
---> Package dovecot.i686 1:2.0.9-7.el6 will be an update
---> Package efibootmgr.i686 0:0.5.4-10.el6 will be updated
---> Package efibootmgr.i686 0:0.5.4-11.el6 will be an update
---> Package gcc-c++.i686 0:4.4.7-3.el6 will be updated
---> Package gcc-c++.i686 0:4.4.7-4.el6 will be an update
---> Package gcc-gfortran.i686 0:4.4.7-3.el6 will be updated
---> Package gcc-gfortran.i686 0:4.4.7-4.el6 will be an update
---> Package gnupg2.i686 0:2.0.14-4.el6 will be updated
---> Package gnupg2.i686 0:2.0.14-6.el6_4 will be an update
---> Package iptables-ipv6.i686 0:1.4.7-9.el6 will be updated
---> Package iptables-ipv6.i686 0:1.4.7-11.el6 will be an update
---> Package java-1.6.0-openjdk.i686 1:1.6.0.0-1.50.1.11.5.el6_3 will be updated
---> Package java-1.6.0-openjdk.i686 1:1.6.0.0-1.66.1.13.0.el6 will be an update
---> Package libcgroup.i686 0:0.37-7.el6 will be updated
---> Package libcgroup.i686 0:0.40.rc1-5.el6 will be an update
---> Package libdrm.i686 0:2.4.39-1.el6 will be updated
---> Package libdrm.i686 0:2.4.45-2.el6 will be an update
---> Package mod_dav_svn.i686 0:1.6.11-7.el6 will be updated
---> Package mod_dav_svn.i686 0:1.6.11-9.el6_4 will be an update
---> Package mysql-server.i686 0:5.1.66-2.el6_3 will be updated
---> Package mysql-server.i686 0:5.1.71-1.el6 will be an update
---> Package nmap.i686 2:5.51-2.el6 will be updated
---> Package nmap.i686 2:5.51-3.el6 will be an update
---> Package ntpdate.i686 0:4.2.4p8-3.el6.centos will be updated
---> Package ntpdate.i686 0:4.2.6p5-1.el6.centos will be an update
---> Package openssh-server.i686 0:5.3p1-84.1.el6 will be updated
---> Package openssh-server.i686 0:5.3p1-94.el6 will be an update
---> Package perl-Net-DNS.i686 0:0.65-4.el6 will be updated
---> Package perl-Net-DNS.i686 0:0.65-5.el6 will be an update
---> Package perl-Socket6.i686 0:0.23-3.el6 will be updated
---> Package perl-Socket6.i686 0:0.23-4.el6 will be an update
---> Package perl-Time-HiRes.i686 4:1.9721-129.el6 will be updated
---> Package perl-Time-HiRes.i686 4:1.9721-136.el6 will be an update
---> Package php-gd.i686 0:5.3.3-22.el6 will be updated
---> Package php-gd.i686 0:5.3.3-26.el6 will be an update
---> Package php-imap.i686 0:5.3.3-22.el6 will be updated
---> Package php-imap.i686 0:5.3.3-26.el6 will be an update
---> Package php-mbstring.i686 0:5.3.3-22.el6 will be updated
---> Package php-mbstring.i686 0:5.3.3-26.el6 will be an update
---> Package php-mysql.i686 0:5.3.3-22.el6 will be updated
---> Package php-mysql.i686 0:5.3.3-26.el6 will be an update
---> Package php-odbc.i686 0:5.3.3-22.el6 will be updated
---> Package php-odbc.i686 0:5.3.3-26.el6 will be an update
---> Package php-pgsql.i686 0:5.3.3-22.el6 will be updated
---> Package php-pgsql.i686 0:5.3.3-26.el6 will be an update
---> Package php-snmp.i686 0:5.3.3-22.el6 will be updated
---> Package php-snmp.i686 0:5.3.3-26.el6 will be an update
---> Package php-xml.i686 0:5.3.3-22.el6 will be updated
---> Package php-xml.i686 0:5.3.3-26.el6 will be an update
---> Package php-xmlrpc.i686 0:5.3.3-22.el6 will be updated
---> Package php-xmlrpc.i686 0:5.3.3-26.el6 will be an update
---> Package pixman.i686 0:0.26.2-4.el6 will be updated
---> Package pixman.i686 0:0.26.2-5.el6_4 will be an update
---> Package postgresql-server.i686 0:8.4.13-1.el6_3 will be updated
---> Package postgresql-server.i686 0:8.4.18-1.el6_4 will be an update
---> Package prelink.i686 0:0.4.6-3.el6 will be updated
---> Package prelink.i686 0:0.4.6-3.1.el6_4 will be an update
---> Package quota.i686 1:3.17-18.el6 will be updated
---> Package quota.i686 1:3.17-20.el6 will be an update
---> Package rpm-build.i686 0:4.8.0-32.el6 will be updated
---> Package rpm-build.i686 0:4.8.0-37.el6 will be an update
---> Package rpm-python.i686 0:4.8.0-32.el6 will be updated
---> Package rpm-python.i686 0:4.8.0-37.el6 will be an update
---> Package sudo.i686 0:1.8.6p3-7.el6 will be updated
---> Package sudo.i686 0:1.8.6p3-12.el6 will be an update
---> Package systemtap.i686 0:1.8-7.el6 will be updated
---> Package systemtap.i686 0:2.3-3.el6 will be an update
---> Package systemtap-client.i686 0:1.8-7.el6 will be updated
---> Package systemtap-client.i686 0:2.3-3.el6 will be an update
---> Package systemtap-devel.i686 0:1.8-7.el6 will be updated
---> Package systemtap-devel.i686 0:2.3-3.el6 will be an update
--> Finished Dependency Resolution
Dependencies Resolved
=========================================================================================================================================================
Package Arch Version Repository Size
=========================================================================================================================================================
Updating:
bind i686 32:9.8.2-0.17.rc1.el6_4.6 base 4.0 M
bind-utils i686 32:9.8.2-0.17.rc1.el6_4.6 base 181 k
cvs i686 1.11.23-16.el6 base 699 k
dhclient i686 12:4.1.1-38.P1.el6.centos base 316 k
dovecot i686 1:2.0.9-7.el6 base 1.9 M
efibootmgr i686 0.5.4-11.el6 base 38 k
gcc-c++ i686 4.4.7-4.el6 base 4.3 M
gcc-gfortran i686 4.4.7-4.el6 base 4.1 M
gnupg2 i686 2.0.14-6.el6_4 base 1.6 M
iptables-ipv6 i686 1.4.7-11.el6 base 95 k
java-1.6.0-openjdk i686 1:1.6.0.0-1.66.1.13.0.el6 base 42 M
libcgroup i686 0.40.rc1-5.el6 base 124 k
libdrm i686 2.4.45-2.el6 base 123 k
mod_dav_svn i686 1.6.11-9.el6_4 base 80 k
mysql-server i686 5.1.71-1.el6 base 8.8 M
nmap i686 2:5.51-3.el6 base 2.7 M
ntpdate i686 4.2.6p5-1.el6.centos base 74 k
openssh-server i686 5.3p1-94.el6 base 310 k
perl-Net-DNS i686 0.65-5.el6 base 232 k
perl-Socket6 i686 0.23-4.el6 base 27 k
perl-Time-HiRes i686 4:1.9721-136.el6 base 48 k
php-gd i686 5.3.3-26.el6 base 105 k
php-imap i686 5.3.3-26.el6 base 50 k
php-mbstring i686 5.3.3-26.el6 base 455 k
php-mysql i686 5.3.3-26.el6 base 79 k
php-odbc i686 5.3.3-26.el6 base 50 k
php-pgsql i686 5.3.3-26.el6 base 69 k
php-snmp i686 5.3.3-26.el6 base 31 k
php-xml i686 5.3.3-26.el6 base 101 k
php-xmlrpc i686 5.3.3-26.el6 base 53 k
pixman i686 0.26.2-5.el6_4 base 206 k
postgresql-server i686 8.4.18-1.el6_4 base 3.4 M
prelink i686 0.4.6-3.1.el6_4 base 1.0 M
quota i686 1:3.17-20.el6 base 207 k
rpm-build i686 4.8.0-37.el6 base 128 k
rpm-python i686 4.8.0-37.el6 base 55 k
sudo i686 1.8.6p3-12.el6 base 696 k
systemtap i686 2.3-3.el6 base 26 k
systemtap-client i686 2.3-3.el6 base 3.4 M
systemtap-devel i686 2.3-3.el6 base 1.4 M
Transaction Summary
=========================================================================================================================================================
Upgrade 40 Package(s)
Total size: 83 M
Downloading Packages:
Running rpm_check_debug
Running Transaction Test
Transaction Check Error:
file /usr/share/locale/en/LC_MESSAGES/systemtap.mo from install of systemtap-2.3-3.el6.i686 conflicts with file from package systemtap-runtime-1.8-7.el6.i686
file /usr/share/locale/en/LC_MESSAGES/systemtap.mo from install of systemtap-client-2.3-3.el6.i686 conflicts with file from package systemtap-runtime-1.8-7.el6.i686
file /usr/share/locale/en/LC_MESSAGES/systemtap.mo from install of systemtap-devel-2.3-3.el6.i686 conflicts with file from package systemtap-runtime-1.8-7.el6.i686
file /usr/share/locale/fr/LC_MESSAGES/systemtap.mo from install of systemtap-2.3-3.el6.i686 conflicts with file from package systemtap-runtime-1.8-7.el6.i686
file /usr/share/locale/fr/LC_MESSAGES/systemtap.mo from install of systemtap-client-2.3-3.el6.i686 conflicts with file from package systemtap-runtime-1.8-7.el6.i686
file /usr/share/locale/fr/LC_MESSAGES/systemtap.mo from install of systemtap-devel-2.3-3.el6.i686 conflicts with file from package systemtap-runtime-1.8-7.el6.i686
file /usr/share/locale/pl/LC_MESSAGES/systemtap.mo from install of systemtap-2.3-3.el6.i686 conflicts with file from package systemtap-runtime-1.8-7.el6.i686
file /usr/share/locale/pl/LC_MESSAGES/systemtap.mo from install of systemtap-client-2.3-3.el6.i686 conflicts with file from package systemtap-runtime-1.8-7.el6.i686
file /usr/share/locale/pl/LC_MESSAGES/systemtap.mo from install of systemtap-devel-2.3-3.el6.i686 conflicts with file from package systemtap-runtime-1.8-7.el6.i686
file /usr/bin/stap-report from install of systemtap-client-2.3-3.el6.i686 conflicts with file from package systemtap-runtime-1.8-7.el6.i686
file /usr/bin/stap-report from install of systemtap-devel-2.3-3.el6.i686 conflicts with file from package systemtap-runtime-1.8-7.el6.i686
file /usr/share/man/man7/stappaths.7.gz from install of systemtap-client-2.3-3.el6.i686 conflicts with file from package systemtap-runtime-1.8-7.el6.i686
file /usr/share/man/man7/stappaths.7.gz from install of systemtap-devel-2.3-3.el6.i686 conflicts with file from package systemtap-runtime-1.8-7.el6.i686
Error Summary
-------------
Running yum-complete-transaction --skip-broken or disabling Epel and RpmForge repositories didn't help either. What else I can try in this situations?
Searching online gives this http://mm3test.fedoraproject.org/hyperkitty/list/devel@mm3test.fedorapro..., but I am not sure if that's relevant link.
Howdy,
I'm not quite sure what might cause that, and I haven't used systemtap before... is that an app you need?
If not, you could always remove it, and that should prevent the conflict errors you're seeing.
-Eric