Subdomain and Alias Locations

After the "Maha (great) Migration" of a giant Plesk site, we have some uncertainty about resulting subdomain and aliases, locations and folders:

We had one subdomain called "dev.himalayanacademy.com" We also have 5 alias (chnames) the subdomain was in a folder *outside* of the "httpdocs" for the main domain,

httpdocs
subdomain
dev

Now, after the migration we have

domains/
dev.himalayanacademy.com/
etc/
fcgi-bin/
homes/
logs/
tmp/
www.gurudeva.org/
cgi-bin/
homes/
logs/
public_html/
# the following are not expanded, but all have sub folders like the above (these are just chnames for Himalayanacademy.com)
www.himalayanacademy.tv/
www.hinduart.org/
www.saivasiddhanta.org/
www.saivasiddhantachurch.org/
www.sanmarga.org/

But

a) there is no html content in the dev.himalayanacademy.com folder and
b) there is no reason to have any directories at all for aliases...

The content for

dev.himalayanacademy.com was migrated to

public_html
dev/
various folders as per original subdomain

Now... is this intended? I would have thought

a) the content for the subdomain would have been moved into the /domains/ folder into it's own folder.

b) alias would not have any folders at all but simply be directives added to httpd.conf

One very, very important issue: I need any FTP users for dev.himalayanacademy.com to be "jailed in" to that directory. Right now it seems our FTP users (have to investigate this further) can do SSH and "see all over the box" which is something we don't want. FTP users for particular domains should be able to do SFTP to just the virtual server to which they are assigned and not have SSH privileges, and not be able to long in via terminal or see "up" the server.

I rooted around once thru all menu items in the GUI ,but have yet to stumble on where to set up these kinds of privileges.

Status: 
Closed (fixed)