I have installed 3.97gpl and saw two warnings, the FollowSymLink and the mod_php one.
I haven't yet FIXed mod_php one, but I applied the fix for FollowSymLink. It broke all Magento sites , so I reverted the changes.
Question 1: If anyone could suggest how to get SymLinksIfOwnerMatch to work with Magento I would appreciate it.
Question 2: How do I reset the alert so it shows up again? I would like to be reminded of the problem and eventually I want to get Magento to work with SymLinksIfOwnerMatch.
Question 3: I am now weary to apply the other fix (mod_php). Which files will it change? Will it let me know which ones before modifying them?
Feedback: it would be nice to give a rollback option of the changes if they break any sites. At least list on screen the changed files and warn the user to make a backup of them before applying the fix.